Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865997:139866030:[+]	chr1:183041021:183041050:[+]	nonBSJ supported	Intron	circRNA 5':AGU-AACCUCCCAGUCUUCCAGAAAAUCCACGUCU 3' \|: \|\|\|\|\|\| \|\|\|\| \|\|: \|\|\|\| target 3':ACGUUUGGAGAC-CAGA--GUUGUAAAA--GCAGU 5'	-15.70	2	KARR-seq
chrX:139866014:139866057:[+]	chr1:183041012:183041065:[+]	nonBSJ supported	Intron	circRNA 5':CCAGAAAAUCCACGUCU------------UCCCAACAAUCCAAGUCUUCCGGAUAA 3' \|\|\|\|\| \|\|:\|\|\| \|\| \|\|\|\|\| \|\|\| \| \|\|\|:\| target 3':AGUCUUCAAC-UGUAGACGUUUGGAGACCAGAGUUGUAAAAG-CAGUUGACCUGUC 5'	-23.70	2	KARR-seq