Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865784:139865810:[+] chr1:114259729:114259772:[-] nonBSJ supported Intron

circRNA 5':AGGUCUUCCAGU-----------------CAAUCAGUGUCUUCC 3'


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target  3':ACCAAAUACUCAAACAAACGAACAAAUACGUUAGUCACAAU-GGU 5'

 -14.80 1 KARR-seq
chrX:139865793:139865810:[+] chr1:114259756:114259772:[-] nonBSJ supported Intron

circRNA 5':AGUCAAUCAGUGUCUUCC 3'


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target  3':AC-GUUAGUCACAAU-GGU 5'

 -14.50 1 KARR-seq