Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866051:139866072:[+] chr1:109472746:109472759:[-] nonBSJ supported Intron

circRNA 5':CGGAUAAUUUGGGUCUUCCUGA 3'


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target  3':ACCU------CCCC--AGGACA 5'

 -12.80 1 KARR-seq
chrX:139866060:139866072:[+] chr1:109472749:109472759:[-] nonBSJ supported Intron

circRNA 5':UGGGUCUUCCUGA 3'


            ||| |||||


target  3':UCCCC--AGGACA 5'

 -11.70 1 KARR-seq