Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866314:139866346:[+]	chr1:93401612:93401648:[-]	nonBSJ supported	Intron	circRNA 5':AUAGCUUC--CGAAAAAUCCAGGUCUUC----CAGGAAA 3' \|\|\|\|:\| \|\|\| \|\|: \|\|\|\| \|\|::\|\| target 3': GUCGGACCCGCUGUCUCUCUCU-GAAGUAGAGUUUUUC 5'	-13.20	1	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866314:139866346:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC