Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866255:139866278:[+] chr1:92741088:92741112:[-] nonBSJ supported Intron

circRNA 5':AAGC-CAUGUCUUCCAGACUAU--CCA 3'


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target  3':AUCGAGUACAGAAGAUC-GAUAAUGG 5'

 -23.40 1 KARR-seq
chrX:139866348:139866360:[+] chr1:92741092:92741105:[-] nonBSJ supported Intron

circRNA 5':CCGUGUCUUCCAG 3'


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target  3':AGUACAGAAGAUCG 5'

 -13.40 1 KARR-seq