Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866649:[+] chr1:62387408:62387430:[+] nonBSJ supported Intron

circRNA 5':AGGUCUUCCAGCAUCUCCAGGGCUUCCAGC 3'


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target  3': CUAGACAAAAG-AGAG----UGAU-GUCU 5'

 -9.60 3 KARR-seq
chrX:139865560:139865586:[+] chr1:62349982:62350009:[+] nonBSJ supported CDS

circRNA 5':CUGGUCUUCCACCAAAUCCAGAUCUUC 3'


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target  3':AACCACAACUAUAUUUCCGUUUAGAAGA 5'

 -12.90 1 KARR-seq