5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866335:139866393:[+] | chr1:43889495:43889571:[+] | nonBSJ supported | Intron |
circRNA 5': UCUU-CCAGGAAA--UCCGUGUCUUCCA-GCAAAUCCACGUCUU---CCAACA-----------AAGCCAUGUCUUC 3' |||| ||| :|||: ||| :| |||||::||: || || ||||||:|:|:| target 3':AGGAAUGGUGAGUAUGGGGCGAUUC-GGUGUGGGAAGGUGUGGAGACUGGAUGAGUAUGGAGCGAUUCGGUGCGGGAA 5' |
-41.80 | 3 | KARR-seq |
| chrX:139866349:139866364:[+] | chr1:43913242:43913254:[+] | nonBSJ supported | CDS |
circRNA 5':CGUGUCUUCCAGCAAA 3' ||| |||||| target 3':CCACCC---GUCGUUA 5' |
-8.30 | 1 | KARR-seq |