Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865860:139865868:[+]	chr1:29070039:29070047:[+]	nonBSJ supported	CDS	circRNA 5':ACGUCUUCC 3' \|\|\|\|:\|\| target 3':AGCAGGAGU 5'	-9.90	1	KARR-seq
chrX:139865815:139865848:[+]	chr1:29069983:29070021:[+]	nonBSJ supported	CDS	circRNA 5':AGAAAUCCAGGUCUUC---CAG---UCAGUCAGUGUCUUC 3' \|\|\|\|:\|\| \|\|:\| \|\|\| :\|\|\|\|\|\|: :\|\|\|\| target 3':CUUUUGGG-CCGGUACAAAGUCUAAGGUCAGUUUUAGAAA 5'	-26.60	1	KARR-seq