Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chr9:33948438:33948493:[-]	chr11:65193833:65193887:[+]	nonBSJ supported	Exon	circRNA 5':GAGUUUGGGCCAGUUUACCACCACCC---CAAGUACACAGCAGAAUAGUACAAGUCACC 3' \| \|\|\| ::\|\|\| \|:\|\|\| \|\| \|\|\| \|\|\|\|:\|\|\| :\|\|\| \| \|\| target 3':AUGAAAGUUGGU-AGAUGAAAAUGUCAAAGUUAAAGUGUUGUCG---UAUGGGCUCUGA 5'	-24.30	3	KARR-seq
chr9:33948436:33948493:[-]	chr11:65193839:65193887:[+]	nonBSJ supported	Exon	circRNA 5':GAGUUUGGGCCAGUUUACCACCACCC---CAAGUACACAGCAGAAUAGUACAAGUCACCCU 3' \| \|\|\| ::\|\|\| \|:\|\|\| \|\| \|\|\| \|\|\|\|:\|\|\| \|\|\|\| target 3':AUGAAAGUUGGU-AGAUGAAAAUGUCAAAGUUAAAGUGUUGUCGUA----------UGGG 5'	-25.20	1	KARR-seq