Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866422:139866466:[+] chr9:37805631:37805672:[+] nonBSJ supported Intron

circRNA 5':GUGUCUUCCAACAAAGGUACGUC-UUC-CAACAAAGGUACGUCUUCC 3'


            ||:|||| || ||| || |||| |||


target  3':AACGGAAGAAAA---CCUUAAAAAAAGAGUAAGA--CAUGAAAAAGA 5'

 -12.70 3 KARR-seq
chrX:139866417:139866442:[+] chr9:37805625:37805641:[+] nonBSJ supported Intron

circRNA 5': UACUUGUGUCUUCCAACAAAGGUACG 3'


            ||||| |||| ||||


target  3':CAUGAAAA-AGAA---------CAUGA 5'

 -6.70 3 KARR-seq