Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865502:139865518:[+] chr8:94744246:94744260:[-] nonBSJ supported 3UTR

circRNA 5':AAGCUCCAAGUCUUCCA 3'


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target  3':AUCGUAC--CAGAAGGA 5'

 -13.80 2 KARR-seq
chrX:139865544:139865574:[+] chr8:94744240:94744275:[-] nonBSJ supported 3UTR

circRNA 5':AGUCUUCCAGCAAUUACUGGUCUUCC-----------ACCAA 3'


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target  3':AUAGAAA-UCGU-----ACCAGAAGGAUUAAUUUUUAUGGUG 5'

 -23.20 2 KARR-seq