Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866060:139866108:[+] chr8:48650613:48650662:[-] nonBSJ supported CDS

circRNA 5':UGGGU-----CUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUCUUCCAGA 3'


            |||: ||:| ||: || ||| |:| |||||


target  3':UCCCGCGUCCGAGGCGUCCGGUCCCGCGC--GGCGCG--CGGCCCGGCAGGUCC 5'

 -24.90 2 KARR-seq
chrX:139866099:139866108:[+] chr8:48650652:48650662:[-] nonBSJ supported CDS

circRNA 5': GUCUUCCAGA 3'


            |:| |||||


target  3':CCGGCAGGUCC 5'

 -10.90 2 KARR-seq