Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866629:139866647:[+] chr7:150935535:150935554:[+] nonBSJ supported CDS

circRNA 5': AGCAUCUCCAGGGCUUCCA 3'


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target  3':GUCGGGGAGGUCCCGAAGGA 5'

 -34.10 5 KARR-seq
chrX:139866792:139866816:[+] chr7:150935535:150935559:[+] nonBSJ supported CDS

circRNA 5':ACAUUCAGGUCUUCCAGUGUCUGCA 3'


           || |:||| :|:||||| |: | |


target  3':UGGAGGUCGGGGAGGUCCCGAAGGA 5'

 -21.80 3 KARR-seq
chrX:139866629:139866650:[+] chr7:150935533:150935554:[+] nonBSJ supported CDS

circRNA 5': AGCAUCUCCAGGGCUUCCAGCA 3'


            ||| :||||||||||||| |


target  3':GUCGGGGAGGUCCCGAAGGAGG 5'

 -34.60 1 KARR-seq