Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865748:139865774:[+] chr7:99621119:99621155:[+] nonBSJ supported CDS

circRNA 5':UCUUCCAGUCAAUCAGU-GUC----------UUCCAGA 3'


            ||||| || ||||: ||| :|||||


target  3':CGAAGGGCACUAAGUCGUCAGUAGUAAGUCCGAGGUC 5'

 -20.90 4 KARR-seq
chrX:139865787:139865813:[+] chr7:99621119:99621155:[+] nonBSJ supported CDS

circRNA 5':UCUUCCAGUCAAUCAGU-GUC----------UUCCAGA 3'


            ||||| || ||||: ||| :|||||


target  3':CGAAGGGCACUAAGUCGUCAGUAGUAAGUCCGAGGUC 5'

 -20.90 2 KARR-seq