Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865822:139865853:[+]	chr6:151673130:151673190:[+]	nonBSJ supported	CDS	circRNA 5':CAGGUCUUCCAGUCAGU-CAG----UGUCUU-------------------------CCAGAA 3' \|\|\|:\|\|: \| \|\| \|\| \|\|\| \|\|:\|\|: \|\|\|\|\| target 3':CUCCGGAGAGAAAGACACGUCCUUGACGGAGACGAAGACACGGGGGACUGACCCAUGGUCU 5'	-21.90	5	KARR-seq
chrX:139865839:139865851:[+]	chr6:151673241:151673253:[+]	nonBSJ supported	CDS	circRNA 5':CAGUGUCUUCCAG 3' \|\|\|\|\|\|\|\|\|\|\| target 3':CUCACAGAAGGUA 5'	-18.10	5	KARR-seq