Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866117:139866142:[+]	chr5:180651263:180651290:[+]	nonBSJ supported	CDS	circRNA 5':AUCUUCCAA--UGGCCUCCAGGUCUUCC 3' \|\|:\|\|\|\| :: \|\|\|\| :\|\|\|\|\|\| target 3':GAGGAGGUACAGUGGGAGCAUCAGAAGU 5'	-25.30	2	KARR-seq
chrX:139866082:139866129:[+]	chr5:180651252:180651291:[+]	nonBSJ supported	CDS	circRNA 5':UCUUCCAAAAAAGCCAUGUCUUCCAGAAAAUCCACAUCUUCCAAUGGC 3' \|:\|\|\| \|\|\|\|\|\|\| :\|\| \|\| \|\|\|\|:: \| \|\|\|\| target 3': GGAGGA------GGUACAGUGGGAGCAUCAGAAGUAGGGCG-UACCC 5'	-26.20	2	KARR-seq