Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865878:139865929:[+]	chr5:6631994:6632046:[-]	nonBSJ supported	5UTR	circRNA 5':AGGUCUUCCAG--UCAAUCCACAUCUU-CCGGAAAAAAUCCAGGUCUUCCAG--CCA 3' \|\|: \|\|\|\|: \|\|\| \|\|\| \|\|\|\|\|\|\|\|:\|\|\|\|: \|\| target 3':ACCGACACCUUGAAGUUGAA---AGACUGGCAGGUGG-AGGUCCAGGAGGUUAAGGA 5'	-36.20	12	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr5:6631994:6632046:[-]	target	-	chr5:6632033-6632034	G>A	LINC-JP	ICGC
chrX:139865878:139865929:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC