Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865952:139866016:[+] chr3:184076387:184076448:[-] nonBSJ supported Intron

circRNA 5':ACGUCUUCCAGAAAAUCCAUGUCUUCCAGAAAAUC-CAUGUCUUCCAGUAACC----UCCCAGUCUUCCA 3'


            ||:||||| ||||||||| || |||| ||| ||||||||:|||


target  3': GCGGAAGG------AGGUACAGAUCUGCUCACACCGUACCUGC-GUCCUCCAAAUAAGGGUCAGGAGGG 5'

 -49.50 2 KARR-seq
chrX:139865952:139865976:[+] chr3:184076387:184076404:[-] nonBSJ supported Intron

circRNA 5':ACGUCUUCCAGAAAAUCCAUGUCUU 3'


            ||:||||| |||||||||


target  3': GCGGAAGG------AGGUACAGAU 5'

 -24.30 2 KARR-seq