Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865652:139865666:[+]	chr3:50326063:50326081:[-]	nonBSJ supported	CDS	circRNA 5':CAGAUCUU---CC-AGCUA 3' \|\|\|\|\|: \|\| \|\|\|: target 3':AUCUAGGCCACGGCUCGGG 5'	-11.60	1	KARR-seq
chrX:139865652:139865675:[+]	chr3:50326063:50326094:[-]	nonBSJ supported	CDS	circRNA 5':CAGAUCU---------UCCAGCUAAUCCAUGUC 3' \|\|\|\|\|: :\|\|\|\|\|\| \|\|\|\|\|\|\| target 3':AUCUAGGCCACGGCUCGGGUCGAC-AGGUACAU 5'	-24.50	1	KARR-seq