5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865970:139866011:[+] | chr21:44834546:44834588:[-] | nonBSJ supported | 3UTR |
circRNA 5':AUGUCUUCCAGAAAAUCCAUGUCUU-CCAGUAACCUCC-CAGUC 3' |||||| ||: || || || |||: target 3':CACAGAAAUUUAUCCGAUAACGUAACGG-CAGACAUAAUGUCGU 5' |
-10.40 | 5 | KARR-seq |
| chrX:139865925:139865940:[+] | chr21:44834570:44834578:[-] | nonBSJ supported | 3UTR |
circRNA 5':AGCCAAUAUAUGUCUU 3' ||| |||| target 3':ACGG-------CAGAC 5' |
-6.30 | 3 | KARR-seq |
| chrX:139865953:139866001:[+] | chr21:44834547:44834588:[-] | nonBSJ supported | 3UTR |
circRNA 5':CGUCUUCCAGAAAAUCCAUGUCUU-CCAGAAAAUCCAUGUCUUCCAGUAA 3' ||||| ||: || || ||| || |||:| target 3':ACAGAAAUUUAUCCGAUAACGUAACGGCAG-------ACAUAAUGUCGU 5' |
-10.20 | 2 | KARR-seq |