Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866411:139866432:[+] chr21:33749553:33749577:[-] nonBSJ supported Exon

circRNA 5':CCAGC-CUAC---UUGUGUCUUCCAA 3'


            ||| |||| |||: ||| ||


target  3':AGUCCCGAUGUCAAACG-AGACCGUA 5'

 -8.50 7 KARR-seq
chrX:139866252:139866264:[+] chr21:33749620:33749632:[-] nonBSJ supported Exon

circRNA 5':ACAAAGCCAUGUC 3'


            |||| |||||:


target  3':GGUUUGGGUACGU 5'

 -13.90 2 KARR-seq
chrX:139866378:139866390:[+] chr21:33749620:33749632:[-] nonBSJ supported Exon

circRNA 5':ACAAAGCCAUGUC 3'


            |||| |||||:


target  3':GGUUUGGGUACGU 5'

 -13.90 4 KARR-seq