Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865519:139865565:[+] chr2:178109754:178109810:[-] nonBSJ supported Intron

circRNA 5': GUAAAUCAAGUCUUCCAGCAA--------AUCCA--GUCUUCCAGCAAUUAC-UGGUC 3'


            |||||| :|| |||| |||| ||||:|| | |||:


target  3':UCAUUUAUG-UAG-AGGUAAGAGAAAUAUGUAGGAAGCAGAGGGAAGAACCACCACCGU 5'

 -25.80 10 KARR-seq