Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865392:139865453:[+] chr2:47130068:47130122:[-] nonBSJ supported 3UTR

circRNA 5':CGACUUCAAGUCUUCCAAUAAUCUCAAGGUCUUCCAGAUAAUCCUGAGCUUCCAGAAAAUCC 3'


            |||| ||| ||| || ||||| |||| || || ||| ||||: |||


target  3':UUUGAUCGUCAUAAGAUGAUGUCAGUUC---AAGGACUCAU--GAGUCG-AGGUUAA-UAGA 5'

 -25.70 5 KARR-seq