Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865827:139865872:[+]	chr17:80114799:80114845:[-]	nonBSJ supported	Intron	circRNA 5': CUUCCAGUCAGUCAGUGUCUUCCAGAAAA-AUCUAC-GUCUUCC--ACCA 3' \|\|\|\|\|\| \| \|\|\|: \|\|\|\|\|\|\| \|\|\|\|\|\| \|\|\|::\| \|\|\| target 3':AGAAGGUGAAA----CACGAAAGGUCUGUAGUAGAUGACAGGGGUUUUGGA 5'	-39.30	3	KARR-seq
chrX:139865793:139865869:[+]	chr17:80121109:80121180:[-]	nonBSJ supported	CDS	circRNA 5': AGUCAAUCAGUGUCUUCCAGAAAGAAAUCCA-GGUCUUCCAGU-CAGUCAGUGUCUU--CCAGAAAAAUCUACGUCUUCCA 3' \|\|: \| \|\|\|\|::\| \|\| \|\|\| :\|\| \|\|\|\|\| \|\|\| :\|: \|\| \|\|\|\| :\|\|:\|\|\| target 3':CUCGACGUGAGACAGGGGCUCGA-----AGGACUCAC--GGUCAGGUCUCCUAU-GACCCGGUCGAACCUGUC-UAGGAGG 5'	-36.20	1	KARR-seq