Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866285:139866342:[+]	chr17:48731591:48731636:[+]	nonBSJ supported	Intron	circRNA 5':CCAGAAAAUCCUUGUCUUCCCUCAAAUCCAUAGCUUCCGAAAA---AUCCAG-GUCU--UCCAG 3' \|\|\|\|\|\|\|\| \|\|\| \|:\|:\| \|\|\|\|\| \|:\|\|\| :\|\|\| \|\|\|\| target 3':UGUCUUUUA----------------UAGUUGUUGUU--CUUUUUGGUGGGUGUUAGAGUAGGUG 5'	-22.90	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866285:139866342:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC