Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865942:139865960:[+] chr17:46019383:46019401:[+] nonBSJ supported Intron

circRNA 5': CUGAAGAUCCACGUCUUCC 3'


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target  3':GGAAAACUUGG-GUAGAAGU 5'

 -13.40 1 KARR-seq
chrX:139865942:139865970:[+] chr17:46019372:46019401:[+] nonBSJ supported Intron

circRNA 5': CUGAAGAUCCACGUCUUCCAGAAAA--UCCA 3'


            || || || |:||||| |||


target  3':GGAAAACUUGG-GUAGAAGUAAACGCAAAGG 5'

 -15.10 1 KARR-seq