Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865917:139865982:[+]	chr17:37683797:37683856:[+]	nonBSJ supported	Intron	circRNA 5':GGUCUUCCAGCCAAUAU-AUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCCAGAA 3' \|: :\|\|\|\|\|\|\| \|\|\| \|\|\|\|: \| \|\| \|:\|\|\|\|:\|\|\| \|\|:\| target 3':ACGUGAGGUCGGACCCGUUACCUCA----UUCUGAG-GC-GGAGGUUUUUGUUUGUUUAUUUGUUU 5'	-32.20	1	KARR-seq
chrX:139865913:139865982:[+]	chr17:37683797:37683861:[+]	nonBSJ supported	Intron	circRNA 5':UCCAG-GUCUUCCAGCCAAUAU-AUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCCAGAA 3' \|\|\| \|: :\|\|\|\|\|\|\| \|\|\| \|\|\|\|: \| \|\| \|:\|\|\|\|:\|\|\| \|\|:\| target 3':CGGUAACGUGAGGUCGGACCCGUUACCUCA----UUCUGAG-GC-GGAGGUUUUUGUUUGUUUAUUUGUUU 5'	-34.80	1	KARR-seq