Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866486:139866504:[+] chr17:33591891:33591909:[+] nonBSJ supported CDS

circRNA 5':ACAAAGGUACGUCUUC-CAG 3'


            || ||: || ||| ||


target  3':AGUCCCCGACCAAAAGUGU 5'

 -6.70 3 KARR-seq
chrX:139866432:139866450:[+] chr17:33591891:33591909:[+] nonBSJ supported CDS

circRNA 5':ACAAAGGUACGUCUUC-CAA 3'


            || ||: || ||| ||


target  3':AGUCCCCGACCAAAAGUGU 5'

 -6.70 2 KARR-seq
chrX:139866450:139866468:[+] chr17:33591891:33591909:[+] nonBSJ supported CDS

circRNA 5':ACAAAGGUACGUCUUC-CAA 3'


            || ||: || ||| ||


target  3':AGUCCCCGACCAAAAGUGU 5'

 -6.70 3 KARR-seq