Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866726:139866741:[+] chr16:624293:624308:[+] nonBSJ supported CDS

circRNA 5':ACCCAGUCU-UCCAUCA 3'


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target  3':CGGGUCCGAGAGG-AGC 5'

 -14.40 4 KARR-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr16:624293:624308:[+] target 2831080 chr16:624297-624298 G>T Epilepsy ClinVar
chr16:624293:624308:[+] target 2976561 chr16:624294-624295 G>T Epilepsy ClinVar