Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866450:139866489:[+] chr15:90815255:90815288:[+] nonBSJ supported 3UTR

circRNA 5': ACAAAGGUACGUCUUCCAACAAAGGUAUGUCUUCCAACAA 3'


            |||| :||:| ||||| || ||| ||| |||||


target  3':UUGUU---GUGUAC---GUUGUGCCC-UACCGAAAGUUGUG 5'

 -17.90 3 KARR-seq
chrX:139866519:139866550:[+] chr15:90815254:90815287:[+] nonBSJ supported 3UTR

circRNA 5':CCAAC-CAAGC--CAUGUCUUCCAGAAAAUCCACG 3'


            |||| || || ||:| |||


target  3':UGUUGUGUACGUUGUGCCCUACCGAAAGUU-GUGU 5'

 -9.60 3 KARR-seq