5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865688:139865718:[+] | chr15:63357390:63357415:[+] | nonBSJ supported | Intron |
circRNA 5':CUGUGUCUUCCACCAAAUCCAAG--UCUUC-CAG 3' |||:||| |||| ||||| || target 3':AACAUAGACAA--------GUUCCAAGAAGAGUA 5' |
-12.50 | 1 | KARR-seq |
| chrX:139865709:139865738:[+] | chr15:63357387:63357412:[+] | nonBSJ supported | Intron |
circRNA 5':AGUCU--UCCAGUAAAUCUAGUUCUUC-CA-GAA 3' |||| || || ||||||| || || target 3':AUAGACAAGUUC--------CAAGAAGAGUACUA 5' |
-10.60 | 1 | KARR-seq |