Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866057:139866088:[+]	chr15:40758660:40758687:[+]	nonBSJ supported	3UTR	circRNA 5':AUUUGGGUCUUCCUGAAA-AUCUACGUCUUCCA 3' \|:\|\|\| \|\|\|\|\|\|\|\|\| \|:\|\| :\|:\|\|\| target 3': AGACC---AAGGACUUUCUGGAACGGGGAGG 5'	-25.60	1	KARR-seq
chrX:139866059:139866135:[+]	chr15:40758632:40758687:[+]	nonBSJ supported	3UTR	circRNA 5': UUGGGUCUUCCUGAAA-AUCUACGUCUUCCAAAAAAGCCAUGUCUUCCAGAAAAUCCACAUCUUCCAAUGGCCUCCAG 3' \|\|\|\| \|\|\|\|\|\|\|\|\| \|:\|\| \|\|\| :\|\|\|\|\| :\|\| \|\|:\|:\|\|\| \|\|\|\| \|\|\| target 3':AGACC---AAGGACUUUCUGGAA--------------CGGGGAGGAAGGGCG---GGG-GUGGGAGGAUCCCGG-GGU 5'	-52.50	1	KARR-seq