Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866629:139866691:[+]	chr14:104145828:104145889:[+]	nonBSJ supported	CDS	circRNA 5':AGCAU-CUCCAGG--GCUUCCAGCAUC-UGCUCGUCUUCCAACAUCUCCA-CGUCUU--CCAGCAUCUCU 3' \|\| \|:\|\| :\|\|: \|\| \|\| \|:\|\|\|: \|\|\|\|\| \|\|:\|\| \|\|\|\| \|\|\| \| \|\|\|\| target 3':AUGAAUGGGGCAAGGUGAGAUGCG-AGUAUGAGU-GAAGG----AGGGGAGGCAGUCCCGGU-G-AGAGC 5'	-42.90	2	KARR-seq
chrX:139866629:139866652:[+]	chr14:104123910:104123932:[+]	nonBSJ supported	CDS	circRNA 5':AGCAUCUCCAGGGCUUC-CAGCAUC 3' \|\| \|\|\|\| \|\|:\|\|:\| \|\|\|\|\|\| target 3':ACGAAGAG--CCUGAGGUGUCGUAA 5'	-26.40	2	KARR-seq