Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865863:139865923:[+]	chr11:69083514:69083568:[+]	nonBSJ supported	Intron	circRNA 5': UCUUCCACCAAAUC-CAGGUCUUCCAGUCAAUCCACAUCU---UCCGGAAAAAAUCCAGGU-CUUC 3' \|\|\|: \|\|\|\|:\| \|\|\|: \|\|\| \|\|\| \|\|\| \|\|\|\|:\|\| \|\|: target 3':AAGAGAUAACGAUAAAGUCCGGU--GUCG---AGGGAGAGAAUAAGGUG------AGGUUCAUGAG 5'	-29.00	4	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865863:139865923:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC