Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866326:139866377:[+]	chr10:103124630:103124683:[-]	nonBSJ supported	Exon	circRNA 5':AAAU-CCAGGUCUUC-CA-GGAAAUCCGUGUCUUCCAGCAAA-UCCA----CGUCUUCCA 3' \|\|\| \|\|\|\|\|\|\| \|\| \|\|\| \|\|\| \|\|\|\|\| \|\|\| \|:\|\|\|:\|\| target 3':GUUAUGGUCCAGCUACGUACCU-----CACCUGCC-UCGUUCGAGGAUAAGGUAGAGGGA 5'	-33.90	2	KARR-seq
chrX:139865551:139865579:[+]	chr10:103124659:103124690:[-]	nonBSJ supported	Exon	circRNA 5':CAGCAAUUA-CUGGUCU-UCCACCAAAUCCA 3' \|\|\|\|\| \|\|: \|\|: \|\| \|\| \|\|\|\| target 3':CUCGUUCGAGGAUAAGGUAGAGGGACGAGGUU 5'	-16.80	1	KARR-seq