5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865771:139865808:[+] | chr10:1046621:1046651:[+] | nonBSJ supported | CDS |
circRNA 5':CAGAAAGAAAUCCAGGUCUUCCAGUCAAUCAGUGUCUU 3' ||| |||||| |:|||| ||||||| target 3': UCUCCCACCAGGUCCU-AGGGUCC-----UCACAGAU 5' |
-24.70 | 4 | KARR-seq |
| chrX:139866202:139866219:[+] | chr10:1061705:1061727:[+] | nonBSJ supported | CDS |
circRNA 5':AUCCGGG----UCUU-CCAGGAA 3' |||||| |||| || ||| target 3':GAGGCCCUAGAAGAACGGACCUG 5' |
-19.20 | 2 | KARR-seq |
| chrX:139865612:139865665:[+] | chr10:1063124:1063162:[+] | nonBSJ supported | CDS |
circRNA 5':AUCCAUGUCUU-----CCAAUAAUUUCAAGGUCUUCCAUCAAAUACAGAUCUUCCAGCU 3' ||| ||||:| ||| |||| |||||| |||| |||| target 3': AGG-ACAGGAAAAAUGGUCG--AAAGG---AGAAGG--------GUCU-----GUCGU 5' |
-23.40 | 1 | KARR-seq |