Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866792:139866814:[+] chr1:240525171:240525193:[+] nonBSJ supported Intron

circRNA 5': ACAUUCAGGUCUUCCAGUGUCUG 3'


            |||:: ||| |||| ||||:


target  3':UUGUGGA-CCAAAAGGAGACAGGU 5'

 -17.80 3 KARR-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866792:139866814:[+] circRNA - chrX:139866793-139866794 C>T LICA-CN ICGC