Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865745:139865795:[+]	chr1:121122927:121122977:[+]	nonBSJ supported	Intron	circRNA 5':AGAUCUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCA-GGUCUU-CCAGU 3' \|\|: :\| \|\| \| \|\|\|: \| \|\|\| \|\|\|\|\|: \|\|\|\| target 3':CCUGCGACGUGCCCGUACCCGAGAGA--CCCUCUACGACGACCAGAGUGGUCC 5'	-16.80	3	KARR-seq
chrX:139865741:139865792:[+]	chr1:121122901:121122955:[+]	nonBSJ supported	Intron	circRNA 5':AUCU---AGAU-CUUCCAGUCA-AUCAG--UGUCUUCCAGAAAGAAAUCCAGGUCUUCC 3' \|\|\| \|\|\|\| \|\| \| \|\|\| \|:\|\|\| \|\|:\|:\| \|\|\| \|:::\|\|\|\|\| target 3':GAGACCCUCUACGACGACCAGAGUGGUCCGACGGGAA--CUUGGACA---UUUGGAAGGA 5'	-21.10	3	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr1:121122927:121122977:[+]	target	-	chr1:121122974-121122975	G>A	EOPC-DE	ICGC