Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865876:139865930:[+]	chr1:45977041:45977077:[-]	nonBSJ supported	CDS	circRNA 5':CCAGGUCUUCCA---GUCAAUCCACAUCUUCCGGAAAAAAUCCAGGUCUUCCAGCCAA 3' \|\|\|\| \|\|\| :\|\|\| \|\|\|\|\|\| \|\|\|\|\|\|\|\|\| target 3':AGUCC-GAACUACCAUAGUGAC-------------------GGUCCA-AAGGUCGGUC 5'	-31.60	6	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865876:139865930:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC