Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865780:139865852:[+]	chr1:9770256:9770322:[+]	nonBSJ supported	5UTR	circRNA 5':AUCCAGGUCUUCCAGUCAAUCA-GUGUCUUCCAGAAAGAAAU-CCA-GGUCUUCCAGUCAGUCAGUGUCUUCCAGA 3' \|\|\| \|: \|\|\|\| \|\|\| \|\|:\| \|\|\| \|\|:\|\| \|\|\|: \|:\| \|\|\|:\|\|\|\| target 3': AGGA-CG---GGUCCCACCGAACACCGAGGAUGAUGAGGCCCGGUGCCGGA--GUCGA-CGGAGA-AGAGGGUCC 5'	-39.00	2	KARR-seq
chrX:139865819:139865852:[+]	chr1:9770256:9770291:[+]	nonBSJ supported	5UTR	circRNA 5':AUCCAGGUCUUCCAGUCAGUCAGUG--UCUUCCAGA 3' \|\|\| \|\|:\| \|\|\|\|: \|\|\|:\|\|\|\| target 3':GAGGCCCGGUGCCGGAGUCGACGGAGAAGAGGGUCC 5'	-27.80	2	KARR-seq