Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr5:109153092:109153105:[+] chr18:74691715:74691735:[-] nonBSJ supported 3UTR

circRNA 5':AGCG----CAGU---UUGGGA 3'


            ||| |||: |||||


target  3':GCGCUUAAGUCGAUUAACCCC 5'

 -13.10 53 RIC-seq
chr5:109153095:109153105:[+] chr18:74691722:74691735:[-] nonBSJ supported 3UTR

circRNA 5':GCAGU---UUGGGA 3'


            |||: |||||


target  3':AGUCGAUUAACCCC 5'

 -10.80 1 RIC-seq
chr5:109153109:109153126:[+] chr18:74691708:74691726:[-] nonBSJ supported 3UTR

circRNA 5':AGCAAAUACUAU--UUCAGA 3'


            || |:|| |||||


target  3':ACGG-UGUGCGCUUAAGUCG 5'

 -8.70 1 RIC-seq