Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr5:65349857:65349894:[+] chr18:74691285:74691319:[-] nonBSJ supported 3UTR

circRNA 5':CUGUUGAUGGAAAAAAUAUAGUCAGGAGCAAGU-C-UGCC 3'


            |||: :|| || |||||| || | :||


target  3':CACAGA-GCCACUCAUUA---AGCCCUCGUCCACGUGCG 5'

 -19.00 1 RIC-seq
chr5:65349857:65349895:[+] chr18:74691285:74691321:[-] nonBSJ supported 3UTR

circRNA 5':CUGUUGAUGGAAAAAAUAUAGUCAGGAGCAAGU-C-UGCCA 3'


            |||: :|| || |||||| || | :|||


target  3':CACAGA-GCCACUCAUUA---AGCCCUCGUCCACGUGCGGA 5'

 -23.00 22 RIC-seq
chr5:65349877:65349895:[+] chr18:74691301:74691321:[-] nonBSJ supported 3UTR

circRNA 5':GUCAGGAGCAAGU-C-UGCCA 3'


            || |||||| || | :|||


target  3':AAGCCCUCGUCCACGUGCGGA 5'

 -18.90 1 RIC-seq
chr5:65349876:65349891:[+] chr18:74729007:74729022:[-] nonBSJ supported 5UTR

circRNA 5':AGUCAGGAGCAAGUCU 3'


            ||| ||||| |||


target  3':CCAGACCUCGAGCAGC 5'

 -17.60 31 RIC-seq