Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr2:160205731:160205743:[-] chr18:74727345:74727357:[-] nonBSJ supported Intron

circRNA 5':ACUGGUGUGGUUA 3'


            |||||||||||


target  3':AGACCACACCAAA 5'

 -20.00 1 RIC-seq
chr2:160205731:160205752:[-] chr18:74727322:74727357:[-] nonBSJ supported Intron

circRNA 5': GGAUGGCCCA-------------CUGGUGUGGUUA 3'


            || :::||| |||||||||||


target  3':ACCCGUUGGGCUUAGGUAUGUACAGACCACACCAAA 5'

 -26.10 2 RIC-seq
chr2:160205731:160205753:[-] chr18:74727321:74727357:[-] nonBSJ supported Intron

circRNA 5': UGGAUGGCCCA-------------CUGGUGUGGUUA 3'


            ||| :::||| |||||||||||


target  3':AACCCGUUGGGCUUAGGUAUGUACAGACCACACCAAA 5'

 -26.80 9 RIC-seq
chr2:160205731:160205754:[-] chr18:74727321:74727357:[-] nonBSJ supported Intron

circRNA 5':GUGGAUGGCCCA-------------CUGGUGUGGUUA 3'


            ||| :::||| |||||||||||


target  3':AACCCGUUGGGCUUAGGUAUGUACAGACCACACCAAA 5'

 -26.80 2 RIC-seq
chr2:160205731:160205757:[-] chr18:74727320:74727357:[-] nonBSJ supported Intron

circRNA 5':UUUGUGGAUGGCCCA-------------CUGGUGUGGUUA 3'


            ||| || :::||| |||||||||||


target  3':UAAC-CC-GUUGGGCUUAGGUAUGUACAGACCACACCAAA 5'

 -27.10 9 RIC-seq